BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034B12SP1|AL429867
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1658 1665 0.0
>3x_Contig1658
Length = 13395
Score = 1665 bits (840), Expect = 0.0
Identities = 854/856 (99%), Gaps = 2/856 (0%)
Strand = Plus / Minus
Query: 1 cttcttcatcttgtcaatgcattttgtagcttgcacattatataataataaaaaagtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 cttcttcatcttgtcaatgcattttgtagcttgcacattatataataataaaaaagtcac 802
Query: 61 gtgccggaatgaattagagagaagcatcgtacattgtaattgacgatacacttcgcatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtgccggaatgaattagagagaagcatcgtacattgtaattgacgatacacttcgcatga 742
Query: 121 ggtgggcgattcaaggtcaataggaatgcattttcttgaacatacatattgtgctttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggtgggcgattcaaggtcaataggaatgcattttcttgaacatacatattgtgctttata 682
Query: 181 tatattttgtgtttggggcttatcccattctaattcttaccagtagaaccaaaacc-acc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 tatattttgtgtttggggcttatcccattctaattcttaccagtagaaccaaaacccacc 622
Query: 240 ggcaccacgttgagtttcctccaaggattcgacgacaacgatctctgcgtcctcaacgat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggcaccacgttgagtttcctccaaggattcgacgacaacgatctctgcgtcctcaacgat 562
Query: 300 cttctcgagaatcaattgcgctacacgatcacctttgttaatttggaaatccttgtctga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttctcgagaatcaattgcgctacacgatcacctttgttaatttggaaatccttgtctga 502
Query: 360 atggttaaacaacactataccaacttcaccggtgtaatctctgtcgacaacaccagcacc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atggttaaacaacactataccaacttcaccggtgtaatctctgtcgacaacaccagcacc 442
Query: 420 ggtttgaataccatgcttcacggccaggccggatctaggagcgattctaccgtatgttcc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtttgaataccatgcttcacggccaggccggatctaggagcgattctaccgtatgttcc 382
Query: 480 cactgggacagtaaaagatatgtctgtcttagcaattccttggcctctggctggaatcac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactgggacagtaaaagatatgtctgtcttagcaattccttggcctctggctggaatcac 322
Query: 540 acctggttgtgaagcgtaaatgtcataaccagctgcagtggtagatccctttgttgggac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctggttgtgaagcgtaaatgtcataaccagctgcagtggtagatccctttgttgggac 262
Query: 600 tttggcatctgcagaacgaagctgcacttttaaactgttggacaacgattctgtcattgt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttggcatctgcagaacgaagctgcacttttaaactgttggacaacgattctgtcattgt 202
Query: 660 atttgtatttatattcttgaggtcgctgagttgaataatggtaaacctcaatcaatacta 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgtatttatattcttgaggtcgctgagttgaataatggtaaacctcaatcaatacta 142
Query: 720 tagtattactaggtcttatcacgaagacaggatgagcttattcataatttt-catttctt 778
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 141 tagtattactaggtcttatcacgaagacaggatgagcttattcataattttgcatttctt 82
Query: 779 ttatattgtttctaaggctgaaaagacgcgtcgacgcgtttgtccacgaacaaaagagta 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ttatattgtttctaaggctgaaaagacgcgtcgacgcgtttgtccacgaacaaaagagta 22
Query: 839 ggttaaagagaaaaca 854
||||||||||||||||
Sbjct: 21 ggttaaagagaaaaca 6
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6644
Number of Sequences: 1807
Number of extensions: 6644
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)